CDS

Accession Number TCMCG048C39324
gbkey CDS
Protein Id XP_031261305.1
Location join(557161..558063,558440..558631,558718..558882,559296..559394,559474..559722,560551..560802,560921..561052,561569..561829,561915..561986,563270..563419,563945..564415,564763..565082,565352..565355)
Gene LOC116119498
GeneID 116119498
Organism Pistacia vera

Protein

Length 1089aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA578116
db_source XM_031405445.1
Definition DNA mismatch repair protein MSH3 [Pistacia vera]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08736        [VIEW IN KEGG]
EC -
KEGG_Pathway ko01524        [VIEW IN KEGG]
ko03430        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05210        [VIEW IN KEGG]
map01524        [VIEW IN KEGG]
map03430        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05210        [VIEW IN KEGG]
GOs GO:0000217        [VIEW IN EMBL-EBI]
GO:0000404        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003684        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0032135        [VIEW IN EMBL-EBI]
GO:0032300        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043570        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCAAACAAAAGCAACAAGTACTTTCCCGCTTCTTTGCTCCCAAACCTAAAACTCCACCTTCATCGTCTTCTTCTTCACCAACTCCAACACCACCACCACCACCACCACCACAACCAACGCCGTGTCCTAAAATATGCGCAACCGTTTCATTTTCTCCTTCAAAACGCAAAGTCGTTTCTACTCAATTCCCTTCTACTACTCCCAAGAAACCGAAGCTCTCCCCCCACACTCACAATCCCATTCCTCTGCCGAAACTTCCAGAACCTTCCAACATTACTCAAACTTCCAGCAAAAAGTACACTCCTTTAGAGCAACAAGTGGTTGACCTCAAAAACAAATACCCCGACGTGCTTCTCATGATCGAAGTCGGTTACAAGTACCGGTTCTTCGGGGAAGACGCGGAAATTGCGGCGAAGGTGTTGGGGATTTACGCTCACGAGGATCACAATTTTATGACGGCGAGCATACCAACTTTTCGATTAAATGTCCACGTGAGGAGATTGGTCAGCGCGGGTTATAAAGTTGGAGTTGTTAAACAGACTGAAACTGCAGCCATTAAGGCCCATGGGCCTTCGCGGTTGGGTCCTTTTGGGAGGGGGTTGTCAGCTTTGTACACTAAGGCTACGTTGGAGGCGGCGGAGGATGTTGGGGGAGGTGAAGAAGGGTGTGGTGGAGAGAGCAATTATTTGTTTTGTGTTGTGGATAATGATATTATAAGCAAAAATGATGATGATTTTGATGTAAGAATTGGTGTTGTTGCGGTGGAGATTTCCACTGGTGATGTAATTTATGGGGAGTTTAATGATGGTTTTTTGAGGAGTGGGCTTGAGGCTGTTGTGCTCAGCTTGTCTCCTGCTGAGCTGCTTCTTGGACAACCGCTTTCGAAACAGACTGAGAAGTTGCTATTGACATATGCTGGACCGGCGTCAAACGTTCGTGTGGAGCGTGCCGCACGTGATTGCTTTAGTGGTGGTGGTGCACTTGCTGAAGTGATGTCATTATATGAGAACATGGGTGAAGAAAATTTAGCAAATAATGACAAGGAAAGTATCGATGTGGGAGAGAAGGGAAATCATAGCTCCACAATTGAGGGCATTATGAACATGCCAGATTTGGCTGTCCAAGCATTAGCATTGACAATTCATCACCTCAAACAATTTGGATTTGAGAGAATTTTGTGCCTTGGAGCTTCATTTCGGTCTTTATCAAGCAACACAGAAATGACTCTCTCGGCGAATGCACTCCAACAACTGGAGGTGTTAAGGAATAACTCAAATGGGTCCGAGTCTGGCTCCTTGCTGCATATTATGAATCATACTCTTACTATATATGGTTCAAGGCTTCTTAGACGTTGGGTAACTCACCCTTTATGTGATAGAAATTTGATATCTGCTCGTCTTGACGTTGTCTCTGAGATTGCAGAATCCATGGGATCTTATAAAACTTCAGAAATTGTTGGTGGGCTTGATGAAAATTCTGATGTAACAATTGTAGAACCTGAATTCTATTATATTCTTTCTTCAGTTTTGACATATTTAGGAAAATCACCTGATATCCAACGTGGAATAACCAGAATCTTCCATCGCACTGCTACTCCATCCGAGTTCATTGCAGTTATCCAAGCCATTTTATATGCTGGAAAACAACTTCAGCGACTTCACATTGGTGAAGAATATAATGAGAAAGCTCTATCAAAGACTGTGCACTCTGTTCTGTTGAAAAAAATGATTTTAATTGCTTCTTCGGCCACTGTGGTTGGCAAAGCTGCAAAGCTGTTGTCTAGTTTAAATAAAGAAGCGGCTGATCAAGGGGATCTACCAAACTTACTTATCATCTCTAATGGCCAGTTTGCAGAGGTTGCTAGAGCCCGGAAAGCTGTTCAATTGGCAAAGGAGGAATTAGATTCTTTAATTAGCTTGTATCGCAAGCAGCTTGGTATGCGCAATTTGGAATTCATGAGTGTGTCTGGAACAACACATTTGATAGAGTTACCTATTGATCTCAAGGTACCTTTGAATTGGGTTAAGATAAATAGTACAAATAAAAAAATCCGCTATCACCCGCCTGAAGTATTGACTGCTTTAGACAAATTAGCATTGGCCAATGAGGAACTTGCTGTTGTCTGCCGAGCTGCTTGGGATAGCTTTCTTAGAGGATTTGCTGAATACTATTCAGATTTCCAAGCTGCTGTGCAAGCTCTAGCCACTTTGGACTGTTTGCATTCACTTGCCATTCTTTCGAGAAATAAGAATTATGTTCGTCCAGTGTTTGTGGATGACAATGAACCTGTTCAAATACATGTCTGCTCTGGTCGTCACCCAGTTTTGGATACTATTCTTCAAGACAATTTTGTCCCGAATGACACAAACTTGCATGCTGACAGAGAGCATTGCCAGATAGTTACTGGACCCAACATGGGCGGAAAGAGTTGCTATATTCGTCAAGTTGCTCTCATTGCTATTATGGCTCAGGTTGGTTCCTTTGTACCAGCATCATCAGCAGAATTGCATGTGCTTAATGGCATCCACACTCGGATGGGTGCTTCTGACAGTATCCAACAAGGGAGAAGCACCTTTCTAGAAGAACTGAGTGAGGCTTCTCATATACTCCACAATTGCACGTCACAGTCTCTGGTTATTATTGATGAACTTGGGAGAGGCACAAGTACACATGATGGTGTAGCTATTGCTTATGCTACGTTGCATCATCTACTAGAGCAAAAGTGCATAGTTCTCTTTGTTACCCACTACCCAAAAATTGCTGATATCAAAAATGAGTTTCCTGGCTCTGTGGGGGCATACCATGTTTCATATTTGACCTCACATAATGTTATGGAGACAACGAACGGTAAATCTAATCAAGAAGATGTCACCTACCTATACAAGCTTGTGCCAGGTGTCTCTGAGAGGAGTTTCGGATTTAAGGTTGCTCAGCTTGCACAGCTACCTTCATCCTGTATTACTCGAGCCAATGTCATGGCTGCAAAACTGGAAGCAGAAGTAAGCAGTAGAGTGGGAAACATAAAAGGAAAAAGGCAGTTACTAGAAATTCCAAGTGGTCAAGAACAAGGAGCACAAGAAAACATGTTGGTATTACCTGATAATTGCTGCGCAAAAAGGTTAGAGGGTCCAGAAGAAGAATTAAGTAGTGCTTTCCAGGAGTTCTTTCTAAACTTGAAGTTTGCAACACTTGATGACAACCCTACAAGAAGCTTCCAGCTTTTGAAGCATGCTAGAAGTATTGCCAAGGAACTACTAATCAGATAA
Protein:  
MGKQKQQVLSRFFAPKPKTPPSSSSSSPTPTPPPPPPPQPTPCPKICATVSFSPSKRKVVSTQFPSTTPKKPKLSPHTHNPIPLPKLPEPSNITQTSSKKYTPLEQQVVDLKNKYPDVLLMIEVGYKYRFFGEDAEIAAKVLGIYAHEDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGPSRLGPFGRGLSALYTKATLEAAEDVGGGEEGCGGESNYLFCVVDNDIISKNDDDFDVRIGVVAVEISTGDVIYGEFNDGFLRSGLEAVVLSLSPAELLLGQPLSKQTEKLLLTYAGPASNVRVERAARDCFSGGGALAEVMSLYENMGEENLANNDKESIDVGEKGNHSSTIEGIMNMPDLAVQALALTIHHLKQFGFERILCLGASFRSLSSNTEMTLSANALQQLEVLRNNSNGSESGSLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDVVSEIAESMGSYKTSEIVGGLDENSDVTIVEPEFYYILSSVLTYLGKSPDIQRGITRIFHRTATPSEFIAVIQAILYAGKQLQRLHIGEEYNEKALSKTVHSVLLKKMILIASSATVVGKAAKLLSSLNKEAADQGDLPNLLIISNGQFAEVARARKAVQLAKEELDSLISLYRKQLGMRNLEFMSVSGTTHLIELPIDLKVPLNWVKINSTNKKIRYHPPEVLTALDKLALANEELAVVCRAAWDSFLRGFAEYYSDFQAAVQALATLDCLHSLAILSRNKNYVRPVFVDDNEPVQIHVCSGRHPVLDTILQDNFVPNDTNLHADREHCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAELHVLNGIHTRMGASDSIQQGRSTFLEELSEASHILHNCTSQSLVIIDELGRGTSTHDGVAIAYATLHHLLEQKCIVLFVTHYPKIADIKNEFPGSVGAYHVSYLTSHNVMETTNGKSNQEDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCITRANVMAAKLEAEVSSRVGNIKGKRQLLEIPSGQEQGAQENMLVLPDNCCAKRLEGPEEELSSAFQEFFLNLKFATLDDNPTRSFQLLKHARSIAKELLIR